A Snakemake module for installing a reference genome along with its supporting files.
This module is designed to be incorporated into an existing Snakemake pipeline for integrative analysis. To use it, you can point towards its Snakefile raw url during module import:
https://raw.githubusercontent.com/ctubbs750/genome/main/workflow/Snakefile
By default, it will install the hg38 human reference genome into the existing project directory under:
/resources/data/genome/{build}
For this module to function, it will look for parameters under the GENOME tag in config file. Copy and paste the config parameters found in /config/config.yaml into the desired project's config file and edit as needed.