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1. Human-GEM Human-GEM Public

   The generic genome-scale metabolic model of Homo sapiens

   MATLAB 130 57

2. yeast-GEM yeast-GEM Public

   The consensus GEM for Saccharomyces cerevisiae

   MATLAB 119 51

3. RAVEN RAVEN Public

   The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.

   MATLAB 123 60

4. GECKO GECKO Public

   Toolbox for including enzyme constraints on a genome-scale model.

   MATLAB 81 51

5. DLKcat DLKcat Public

   Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic models (ecGEMs) reconstruction

   Python 186 66